A multiple format Hi-C data parser

This package is a parser to import HiC data into R. It accepts several type of data: tabular files, Cooler `.cool` or `.mcool` files, Juicer `.hic` files or HiC-Pro `.matrix` and `.bed` files. The HiC data can be several files, for several replicates and conditions. The data is formated in an InteractionSet object.

See also

Useful links:

• https://github.com/emaigne/HiCParser

• Report bugs at https://github.com/emaigne/HiCParser/issues

Author

Maintainer: Maigné Élise elise.maigne@inrae.fr

Authors:

• Zytnicki Matthias matthias.zytnicki@inrae.fr